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    <title>Chameth.com - posts like break-everything-fuzz-testing, debugging-beyond-the-debugger but not finding-an-awkward-bug-with-claude-code, modern-css-is-fun, why-you-should-be-using-https</title>
    <subtitle>Personal homepage of Chris Smith</subtitle>
    <link href="https://chameth.com/feeds/posts/like/break-everything-fuzz-testing,debugging-beyond-the-debugger/unlike/finding-an-awkward-bug-with-claude-code,modern-css-is-fun,why-you-should-be-using-https/" rel="self"/>
    <link href="https://chameth.com/"/>
    <icon>https://chameth.com/favicon.png</icon>
    <updated>2020-04-26T00:00:00Z</updated>
    <id>https://chameth.com/</id>
    <author>
        <name>Chris Smith</name>
    </author>
    <entry>
        <title>How to break everything by fuzz testing</title>
        <link href="https://chameth.com/break-everything-fuzz-testing/"/>
        <updated>2020-04-26T00:00:00Z</updated>
        <id>https://chameth.com/break-everything-fuzz-testing/</id>
        <content xml:lang="en" type="html">&lt;figure class=&#34;image left&#34;&gt;
  &lt;picture&gt;
      &lt;source srcset=&#34;https://chameth.com/break-everything-fuzz-testing/chimp.avif&#34; type=&#34;image/avif&#34;/&gt;
      &lt;source srcset=&#34;https://chameth.com/break-everything-fuzz-testing/chimp.webp&#34; type=&#34;image/webp&#34;/&gt;
      &lt;img src=&#34;https://chameth.com/break-everything-fuzz-testing/chimp.jpg&#34; alt=&#34;Chimp sat at a typewriter&#34; loading=&#34;lazy&#34; width=&#34;300&#34; height=&#34;239&#34;/&gt;
  &lt;/picture&gt;
  &lt;figcaption&gt;&lt;p&gt;Fuzz testing is a bit like the infinite monkey theorem, but instead of Shakespeare you get crashes.&lt;/p&gt;
&lt;/figcaption&gt;
&lt;/figure&gt;
&lt;p&gt;Fuzz testing, if you’re not aware, is a form of testing that uses procedurally generated random
inputs to see how a program behaves. For instance, if you were fuzz testing a web page renderer
you might generate a bunch of HTML - some valid, and some not - and make sure the rendering
process didn’t unexpectedly crash.&lt;/p&gt;
&lt;p&gt;Fuzz testing doesn’t readily lend itself to all types of software, but it particularly shines
in cases where some kind of complex user input is accepted and processed in some way - like
the aforementioned web page renderer. I was recently adding a library to parse EXIF data to
images to an Internet-facing service and realised it was a perfect opportunity to do some fuzz
testing. Even if I didn’t find any issues, I’d improve my confidence that the library was safe
enough to expose to the Internet.&lt;/p&gt;
&lt;h3 id=&#34;breaking-my-exif-library&#34;&gt;Breaking my EXIF library&lt;/h3&gt;
&lt;p&gt;I wrote a quick harness to run &lt;a href=&#34;https://github.com/dvyukov/go-fuzz&#34;&gt;go-fuzz&lt;/a&gt; on the library,
and gave it some pre-existing demo files as sample input. The way go-fuzz works is that it
instruments your code and then mutates the inputs to try to improve the coverage. For example,
if I had some sample data that had an EXIF tag with a value of 1 then go-fuzz might change it
to a 2 and see if the code follows a different path. In most cases it won’t but when it does,
they tend to be very interesting cases.&lt;/p&gt;
&lt;!--more--&gt;
&lt;p&gt;One of the first issues that go-fuzz found was that some values in a maker note field would cause
the library to panic (i.e., crash). This happened because there was a check to see if the first
six characters were “Nikon” and a null byte, without first checking to see if there were actually
six characters available. This is a kind of bug that doesn’t happen much with “real” data - as
the field is either not present or completed correctly - but could easily be exploited once this
code is exposed to the Internet.&lt;/p&gt;
&lt;p&gt;Another interesting bug that go-fuzz found was that if a tag had a particularly large count, the
library would try to allocate an obscene amount of memory and die. There was already a check in
the code that was meant to avoid this exact scenario, but go-fuzz managed to find a way around
it. Each tag has a size (for example an integer tag takes a fixed number of bytes) and a count;
the existing check multiplied the two together and made sure that the result wasn’t too large.
For most cases this was fine but go-fuzz found a case where the count was so large that when
multiplied by the size of the tag it overflowed the integer and became negative, thus passing
the sanity check but then subsequently failing when it came around to actually allocating the
memory.&lt;/p&gt;
&lt;p&gt;The final bug of note that go-fuzz found was the most interesting. EXIF data is stored in IFDs
(“Image File Directories”), and each IFD provides what is effectively a pointer (a byte offset)
to the next one. The EXIF library already had a check to make sure that these didn’t loop, but
it only checked the immediately preceding IFD - so if IFD 1 linked to IFD 2, it would catch IFD 2
linking back to IFD 1 and break the loop with an error. Go-fuzz found that having three interlinked
IFDs had the same issue, though, and the guard code wasn’t triggered. This created an infinite
loop, maxing out a CPU core until the process was eventually killed - one of the worst kind of
bugs you could have in an Internet-facing service which doesn’t deal with private data! The fix
for this was fairly straightforward - I just made the library keep a record of the previously
visited IFDs and bail out if it found a loop.&lt;/p&gt;
&lt;h3 id=&#34;breaking-my-ide&#34;&gt;Breaking my IDE&lt;/h3&gt;
&lt;p&gt;When go-fuzz detects an issue it outputs not only the details of the problem (the stack trace,
error message, and so forth) but also the input that generated the problem. This is useful for
reproducing and making sure the issue is fixed, but it also makes it really easy to write
a test to ensure that the behaviour never regresses in the future.&lt;/p&gt;
&lt;p&gt;As I was working through fixing the bugs that go-fuzz found, I dutifully added new tests where
needed. After adding the sample input with looping IFDs to the project, I switched to IDEA to
write a test to use it. I clicked on the input file to copy the file name, and then the entire
IDE hung and had to be restarted. Uh oh! When I restarted IDEA, it immediately began indexing
the project and again hung. It turns out IDEA parses EXIF data (presumably, even if it does
nothing else with the data, to get the rotation property for images), and the library they use -
an independent one written on Java - had the same bug as the Go library I was using.&lt;/p&gt;
&lt;p&gt;In order to stop IDEA from indexing the file and becoming unusable I renamed it from a ‘.tif’
extension to ‘.dat’, and everything went back to normal. I thought I’d best report the bug to
JetBrains, though, so they could put a proper fix in.&lt;/p&gt;
&lt;h3 id=&#34;breaking-youtrack&#34;&gt;Breaking YouTrack&lt;/h3&gt;
&lt;p&gt;JetBrains use their own issue tracker called YouTrack for reporting bugs in IDEA. I dutifully
went over and described the problem, attaching the log files from the IDE, a description of how
the file was malformed, and carefully selected the .dat version of the file to upload so that it
wouldn’t cause anyone else the same immediate problem.&lt;/p&gt;
&lt;p&gt;After trying to upload the file I got a strange error back. Uh oh! I submitted the IDEA issue as
it stood, unable to see if the attachments had even uploaded, and went and wrote up an issue for
YouTrack itself about the error message. While I was doing that, YouTrack seemed to slow down and
become really annoying to use. I had a sinking feeling the exact same thing was probably
happening as with IDEA and my library - but this time YouTrack had content-sniffed the file
instead of relying on the file extension. In hindsight, I should’ve put the file in a passworded
archive to ensure no automated tools got hold of it. I marked the issue as a security problem as in
a service like YouTrack it presents a denial-of-service opportunity&lt;sup id=&#34;fnref:1&#34;&gt;&lt;a class=&#34;footnote-ref&#34; href=&#34;#fn:1&#34; role=&#34;doc-noteref&#34;&gt;1&lt;/a&gt;&lt;/sup&gt; (remember when I said it was
one of the worst kinds of bugs you could have in an Internet-facing service?…)&lt;/p&gt;
&lt;p&gt;Shortly after I raised my YouTrack ticket, a notice appeared at the top of the page saying they
were investigating the current performance issues. Uh oh! I was holding out hope that this was
unrelated to me uploading the buggy dat file, but the timing all seemed a bit suspect. I shot
support an e-mail saying I think I might be the root cause for their performance issues and
linked to the ticket. In the time it took me to e-mail them, the entire site had been
put into maintenance mode. I got an e-mail back a few hours later confirming the outage
was in fact all my fault, as I’d feared. Within the space of days the JetBrains security team
had fixed the issue in YouTrack, which was a pretty nice turnaround.&lt;/p&gt;
&lt;p&gt;So if you were trying to access YouTrack at the start of March and couldn’t - I’m sorry, I didn’t
mean to! Also, if you’re building an Internet-facing service that takes user input you should
really consider running a fuzz tester against it!&lt;/p&gt;
&lt;div class=&#34;footnotes&#34; role=&#34;doc-endnotes&#34;&gt;
&lt;hr/&gt;
&lt;ol&gt;
&lt;li id=&#34;fn:1&#34;&gt;
&lt;p&gt;“We have a problem”. “Remember, there are no such things as problems,
only opportunities”. “Well then we have a DDoS opportunity.”
– &lt;a href=&#34;https://twitter.com/J4vv4D/status/671090709588496384&#34;&gt;@J4vv4d&lt;/a&gt; &lt;a class=&#34;footnote-backref&#34; href=&#34;#fnref:1&#34; role=&#34;doc-backlink&#34;&gt;↩︎&lt;/a&gt;&lt;/p&gt;
&lt;/li&gt;
&lt;/ol&gt;
&lt;/div&gt;
</content>
    </entry>
    <entry>
        <title>Debugging beyond the debugger</title>
        <link href="https://chameth.com/debugging-beyond-the-debugger/"/>
        <updated>2019-05-08T00:00:00Z</updated>
        <id>https://chameth.com/debugging-beyond-the-debugger/</id>
        <content xml:lang="en" type="html">&lt;figure class=&#34;image right&#34;&gt;
  &lt;picture&gt;
      &lt;source srcset=&#34;https://chameth.com/debugging-beyond-the-debugger/tools.avif&#34; type=&#34;image/avif&#34;/&gt;
      &lt;source srcset=&#34;https://chameth.com/debugging-beyond-the-debugger/tools.webp&#34; type=&#34;image/webp&#34;/&gt;
      &lt;img src=&#34;https://chameth.com/debugging-beyond-the-debugger/tools.jpg&#34; alt=&#34;Collection of tools hanging on a wall&#34; loading=&#34;lazy&#34; width=&#34;300&#34; height=&#34;396&#34;/&gt;
  &lt;/picture&gt;
  &lt;figcaption&gt;&lt;p&gt;Real-life debugging tools&lt;/p&gt;
&lt;/figcaption&gt;
&lt;/figure&gt;
&lt;p&gt;Most programming — and sysadmin — problems can be debugged in a
fairly straight forward manner using logs, print statements,
educated guesses, or an actual debugger. Sometimes, though, the
problem is more elusive. There’s a wider box of tricks that can
be employed in these cases but I’ve not managed to find a nice
overview of them, so here’s mine. I’m mainly focusing on Linux
and similar systems, but there tend to be alternatives available
for other Operating Systems or VMs if you seek them out.&lt;/p&gt;
&lt;h3 id=&#34;networking&#34;&gt;Networking&lt;/h3&gt;
&lt;h4 id=&#34;tcpdump&#34;&gt;tcpdump&lt;/h4&gt;
&lt;p&gt;&lt;code&gt;tcpdump&lt;/code&gt; prints out descriptions of packets on a network interface. You can
apply filters to limit which packets are displayed, chose to dump the entire
content of the packet, and so forth.&lt;/p&gt;
&lt;!--more--&gt;
&lt;p&gt;Typical usage might look something like:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# tcpdump -nSi eth0 port 80
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;tcpdump: verbose output suppressed, use -v or -vv for full protocol decode
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;listening on eth0, link-type EN10MB (Ethernet), capture size 262144 bytes
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;16:03:35.577781 IP6 2001:db8::1.54742 &amp;gt; 2001:db8::2.80: Flags [S], seq 2815779044, win 64800, options [mss 1440,sackOK,TS val 2378811665 ecr 0,nop,wscale 7], length 0
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;16:03:35.586853 IP6 2001:db8::2.80 &amp;gt; 2001:db8::1.54742: Flags [S.], seq 1522609102, ack 2815779045, win 28560, options [mss 1440,sackOK,TS val 3063610173 ecr 2378811665,nop,wscale 7], length 0
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;16:03:35.586877 IP6 2001:db8::1.54742 &amp;gt; 2001:db8::2.80: Flags [.], ack 1522609103, win 507, options [nop,nop,TS val 2378811674 ecr 3063610173], length 0
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;16:03:35.620678 IP6 2001:db8::1.54742 &amp;gt; 2001:db8::2.80: Flags [P.], seq 2815779045:2815779399, ack 1522609103, win 507, options [nop,nop,TS val 2378811708 ecr 3063610173], length 354: HTTP: GET / HTTP/1.1
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;Here you can see the start of a plaintext HTTP request: the three-way
handshake as the TCP connection is established followed by a GET request.
Even if the data is encrypted as it will be in most cases, it’s often useful
to see the “shape” of the transmissions: did the client start sending data
when it connected, did the server ever respond, etc.&lt;/p&gt;
&lt;p&gt;&lt;a href=&#34;https://danielmiessler.com/study/tcpdump/&#34;&gt;Daniel Miessler has a good tutorial on tcpdump&lt;/a&gt;
if you’re not familiar with it and don’t want to jump straight into the man
page.&lt;/p&gt;
&lt;h5 id=&#34;-with-docker&#34;&gt;… with Docker&lt;/h5&gt;
&lt;p&gt;Docker sets up separate network namespaces for each container. To see the
traffic across the interfaces of a single container you can &lt;code&gt;nsenter&lt;/code&gt; the
container’s network namespace:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# nsenter -t $(docker inspect --format &amp;#39;{{.State.Pid}}&amp;#39; my_container) -n tcpdump -nS port 80
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;This retrieves the PID for the container, and tells &lt;code&gt;nsenter&lt;/code&gt; to enter the
network (&lt;code&gt;-n&lt;/code&gt;) namespace from the given target (&lt;code&gt;-t&lt;/code&gt;) PID, and then run the
given command (in this case &lt;code&gt;tcpdump ...&lt;/code&gt;).&lt;/p&gt;
&lt;h4 id=&#34;openssl-s-client--s-server&#34;&gt;openssl s_client / s_server&lt;/h4&gt;
&lt;p&gt;When a connection is using TLS it’s often useful to try connecting to the
server and see what certificate it presents, algorithms it negotiates, and
so forth. OpenSSL offers two useful subcommands which can help with this:
&lt;code&gt;s_client&lt;/code&gt; for connecting as a client, and &lt;code&gt;s_server&lt;/code&gt; for listening to
connections.&lt;/p&gt;
&lt;p&gt;For example, using &lt;code&gt;s_client&lt;/code&gt; to connect to &lt;code&gt;google.com&lt;/code&gt; on the standard
HTTPS port shows us details about the server cert and its verification
status:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ openssl s_client -connect google.com:443
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;CONNECTED(00000003)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;depth=2 OU = GlobalSign Root CA - R2, O = GlobalSign, CN = GlobalSign
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;verify return:1
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;depth=1 C = US, O = Google Trust Services, CN = Google Internet Authority G3
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;verify return:1
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;depth=0 C = US, ST = California, L = Mountain View, O = Google LLC, CN = *.google.com
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;verify return:1
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;---
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Certificate chain
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; 0 s:C = US, ST = California, L = Mountain View, O = Google LLC, CN = *.google.com
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;   i:C = US, O = Google Trust Services, CN = Google Internet Authority G3
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; 1 s:C = US, O = Google Trust Services, CN = Google Internet Authority G3
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;   i:OU = GlobalSign Root CA - R2, O = GlobalSign, CN = GlobalSign
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;---
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;Whereas connecting to my webserver and providing an unknown host in the SNI
field results in an SSL alert 112 (“The server name sent was not recognized”)
and no server certificate is sent:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ openssl s_client -connect chameth.com:443 -servername example.com
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;CONNECTED(00000003)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;140384831313024:error:14094458:SSL routines:ssl3_read_bytes:tlsv1 unrecognized name:../ssl/record/rec_layer_s3.c:1536:SSL alert number 112
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;---
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;no peer certificate available
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;---
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;Often if you hit this kind of alert in an application the exact error will be
lost somewhere in the many layers between the SSL library and the logs, so
being able to directly connect and test can help diagnose a lot of issues.&lt;/p&gt;
&lt;p&gt;Once a connection is established you can read and write plain text and it
will be encrypted and decrypted automatically.&lt;/p&gt;
&lt;h4 id=&#34;java-apps&#34;&gt;Java apps&lt;/h4&gt;
&lt;p&gt;If a Java app is involved in the connection, you can enable a lot of built-in
debugging with a simple JVM property: &lt;code&gt;javax.net.debug&lt;/code&gt;. You can tweak
what exactly gets logged, but the easiest thing to do is just set the property
to &lt;code&gt;all&lt;/code&gt; and you’ll see information about certificate chains, verification,
and packet dumps:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ java -Djavax.net.debug=all -jar ....
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;found key for : duke
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;chain [0] = [
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;[
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  Version: V1
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  Subject: CN=Duke, OU=Java Software, O=&amp;#34;Sun Microsystems, Inc.&amp;#34;,
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  L=Cupertino, ST=CA, C=US
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;More information about Java’s debugging options is available on
&lt;a href=&#34;https://docs.oracle.com/javase/7/docs/technotes/guides/security/jsse/ReadDebug.html&#34;&gt;docs.oracle.com&lt;/a&gt;.&lt;/p&gt;
&lt;h3 id=&#34;thread-and-core-dumps&#34;&gt;Thread and core dumps&lt;/h3&gt;
&lt;p&gt;Higher-level languages frequently provide an interactive way to dump the
current execution state of all of their threads (a “thread dump”). This
is useful to spot deadlocks, some types of race conditions, and as a
quick and dirty method of investigating hangs or excessive CPU usage.&lt;/p&gt;
&lt;p&gt;With both Java and Go applications you can send a QUIT signal to have a
thread dump printed out; Go applications will quit after doing so, Java
ones will carry on running. At most terminals you can hit &lt;code&gt;Ctrl&lt;/code&gt; and &lt;code&gt;\&lt;/code&gt; to
send a QUIT signal.&lt;/p&gt;
&lt;p&gt;For Java you can also use the &lt;code&gt;jstack&lt;/code&gt; tool from the JDK to dump threads
by PID; this can be useful if the application is running in the background
or has redirected sysout:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ jstack 8321
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Attaching to process ID 8321, please wait...
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Debugger attached successfully.
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Client compiler detected.
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Thread t@5: (state = BLOCKED)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; - java.lang.Object.wait(long) @bci=-1107318896 (Interpreted frame)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; - java.lang.Object.wait(long) @bci=0 (Interpreted frame)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; - java.lang.ref.ReferenceQueue.remove(long) @bci=44, line=116 (Interpreted frame)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; - java.lang.ref.ReferenceQueue.remove() @bci=2, line=132 (Interpreted frame)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt; - java.lang.ref.Finalizer$FinalizerThread.run() @bci=3, line=159 (Interpreted frame)
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;A core dump provides more complete information about the state of a process,
but is often more complex to interpret. The &lt;code&gt;gcore&lt;/code&gt; utility from GDB will
create a core dump of a process with a given PID. You can then generally
load the core file using your normal debugger, depending on the language
in question.&lt;/p&gt;
&lt;h3 id=&#34;system-calls&#34;&gt;System calls&lt;/h3&gt;
&lt;p&gt;&lt;code&gt;strace&lt;/code&gt; is the swiss army knife for seeing what a process is doing. It
details each system call made by a program (you can filter them down, of
course). For example:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ strace -e read curl https://google.com/
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;read(3, &amp;#34;\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0&amp;gt;\0\1\0\0\0 \236\0\0\0\0\0\0&amp;#34;..., 832) = 832
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;read(3, &amp;#34;\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0&amp;gt;\0\1\0\0\0P!\0\0\0\0\0\0&amp;#34;..., 832) = 832
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;read(3, &amp;#34;\177ELF\2\1\1\3\0\0\0\0\0\0\0\0\3\0&amp;gt;\0\1\0\0\0\200l\2\0\0\0\0\0&amp;#34;..., 832) = 832
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;read(3, &amp;#34;\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0&amp;gt;\0\1\0\0\0\20Q\0\0\0\0\0\0&amp;#34;..., 832) = 832
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;read(3, &amp;#34;\0\0\0\0\0\0\0\4\25\345\366\302\273sE6\365wI\225\321|\3435Z\362\216\372\215\251aO&amp;#34;..., 253) = 253
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;&amp;lt;HTML&amp;gt;&amp;lt;HEAD&amp;gt;&amp;lt;meta http-equiv=&amp;#34;content-type&amp;#34; content=&amp;#34;text/html;charset=utf-8&amp;#34;&amp;gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;&amp;lt;TITLE&amp;gt;301 Moved&amp;lt;/TITLE&amp;gt;&amp;lt;/HEAD&amp;gt;&amp;lt;BODY&amp;gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;&amp;lt;H1&amp;gt;301 Moved&amp;lt;/H1&amp;gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;The document has moved
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;&amp;lt;A HREF=&amp;#34;https://www.google.com/&amp;#34;&amp;gt;here&amp;lt;/A&amp;gt;.
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;&amp;lt;/BODY&amp;gt;&amp;lt;/HTML&amp;gt;
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;read(3, &amp;#34;\27\3\3\0!&amp;#34;, 5)                = 5
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;&lt;a href=&#34;http://www.brendangregg.com/blog/2014-05-12/strace-wow-much-syscall.html&#34;&gt;Brendan Gregg&lt;/a&gt;
has a nice guide on &lt;code&gt;strace&lt;/code&gt; and alternatives.&lt;/p&gt;
&lt;h4 id=&#34;-with-docker-1&#34;&gt;… with docker&lt;/h4&gt;
&lt;p&gt;When the application is running in docker you can usually just &lt;code&gt;strace&lt;/code&gt; it
from the host with the correct PID
(from e.g. &lt;code&gt;docker inspect --format &amp;#39;{{.State.Pid}}&amp;#39; my_container&lt;/code&gt;).
Sometimes you may need to trace the startup of an application though, which is
a bit trickier. Instead you can run a new container using the same PID
namespace as your target, and the permissions needed to &lt;code&gt;strace&lt;/code&gt;:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ docker run --rm -it --pid=container:my_container \
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  --net=container:my_container \
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  --cap-add sys_admin \
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  --cap-add sys_ptrace \
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;  alpine
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;From within the new container you can install strace, and trace any running
program within the target container using &lt;code&gt;strace -p&lt;/code&gt; as normal. To start a
new program you need access to the target container’s filesystem, which you
can get to via &lt;code&gt;/proc/1/root&lt;/code&gt; (PID &lt;code&gt;1&lt;/code&gt; being the main process that docker
started in the target container).&lt;/p&gt;
&lt;h3 id=&#34;files&#34;&gt;Files&lt;/h3&gt;
&lt;p&gt;Sometimes the problem might relate to file access. There are a couple of
straight forward — but nonetheless useful — tools which might help here.
&lt;code&gt;inotifywait&lt;/code&gt; uses the Linux &lt;code&gt;inotify&lt;/code&gt; subsystem to watch files or directories
for operations. For example:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ inotifywait -mr site/content
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Setting up watches.  Beware: since -r was given, this may take a while!
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;Watches established.
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;site/content/post/ MODIFY 2019-05-08-debugging-beyond-the-debugger.md
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;site/content/post/ OPEN 2019-05-08-debugging-beyond-the-debugger.md
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;site/content/post/ MODIFY 2019-05-08-debugging-beyond-the-debugger.md
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;site/content/post/ MODIFY 2019-05-08-debugging-beyond-the-debugger.md
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;site/content/post/ CLOSE_WRITE,CLOSE 2019-05-08-debugging-beyond-the-debugger.md
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;p&gt;Here the &lt;code&gt;-m&lt;/code&gt; switch makes &lt;code&gt;inotifywait&lt;/code&gt; monitor the files forever (instead
of exiting on the first modification, which is the normal behaviour) and &lt;code&gt;r&lt;/code&gt;
makes it recurse into the directory and monitor each file and subdirectory in
there.&lt;/p&gt;
&lt;p&gt;If you want to see what processes currently have a file open, &lt;code&gt;fuser&lt;/code&gt; is the
go-to tool. For example:&lt;/p&gt;
&lt;pre class=&#34;chroma-chroma&#34;&gt;&lt;code&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;$ fuser -v /
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;                     USER PID ACCESS COMMAND
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;/:                   root     kernel mount /
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;                     chris      2961 .rc.. systemd
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;                     chris      2986 .r... gdm-x-session
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;                     chris      2994 .r... dbus-daemon
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;                     chris      3001 .r... gnome-session-b
&lt;/span&gt;&lt;/span&gt;&lt;span class=&#34;chroma-line&#34;&gt;&lt;span class=&#34;chroma-cl&#34;&gt;# ...
&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;h3 id=&#34;honourable-mentions&#34;&gt;Honourable mentions&lt;/h3&gt;
&lt;p&gt;These aren’t really debugging tools, but I feel it’s worth mentioning as
they often feature somewhere along the debugging-of-weird-problems journey.&lt;/p&gt;
&lt;p&gt;I’ve seen some weird and wonderful problems happen
because a disk is full, so a quick &lt;code&gt;df&lt;/code&gt; early on in the debugging process
never hurts. Some apps may hang, some may corrupt their config, some may
fall over and die; sometimes the manner in which they fail doesn’t obviously
point to a disk space issue.&lt;/p&gt;
&lt;p&gt;Another issue that comes up now and then — especially inside VMs or
other environment that don’t have a decent amount of “noise” happening —
is entropy exhaustion. A quick look at &lt;code&gt;/proc/sys/kernel/random/entropy_avail&lt;/code&gt;
should be enough to confirm that everything is ticking along nicely. If it’s
exceedingly low then you may find that anything involving random number
generation stalls (TLS connections for example).&lt;/p&gt;
</content>
    </entry>
</feed>
