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Thinking more about backups

2025-11-01T00:00:00Z

The Backblaze logo

Almost a year ago I wrote about how I do backups with Restic and Hetzner. That system has been ticking along well ever since, but recently I had some… thoughts. These backups are all well and good if I accidentally delete a file, or a database gets corrupted, or something, but there are two glaring issues:

Firstly, I’m backing up my Hetzner server to Hetzner cloud storage. If something happens to Hetzner — or my Hetzner account — then all my eggs go down with that basket. Obviously Hetzner are a big organisation and aren’t likely to just vanish overnight, but I’m less confident about my account. Could a false abuse report get it suspended? What if the UK passes even more dumb laws and Hetzner decide it’s easier just to not do business with people here? This is the same sort of concern I have about Google accounts: if you have half of your life in Google Drive and Google Mail, what happens if you comment on a YouTube video, get flagged by an AI moderation process, and your account gets suspended? It’s probably not very likely, but these are things my brain likes to dwell on.

Secondly, the credentials to access the backups sit on each machine that is backed up. If someone malicious gained access to the machine, they’d also have access to delete or tamper with all the backups. It feels a little silly that the same attack could take down both the originals and the backups. There’s no way to avoid that with Hetzner’s S3 implementation, as far as I can tell.

Exploring options

I toyed with the idea of making local copies of the backups, but the only way to avoid the same problems would be to keep them offline and do a manual copy every now and then. I didn’t really want to do that, and was concerned that if I did a monthly offline backup then I stood to lose up to a month of data in the worst case.

I then looked around at other S3 providers. Amazon’s glacier offering is tempting due to its very low storage costs, but you pay for that if you ever want to restore anything. There are also lots of weird pricing edge cases around moving data between storage classes, minimum file sizes, and so on. A much better option is Backblaze’s B2 product. Their pricing is much more straight-forward, and they have an interesting feature that’s particularly useful in this case: lifecycle rules. Coupled with the ability to create API keys that don’t have access to delete files (just “hide” them), this allows for what’s effectively an append-only store.

This works more-or-less out of the box with Restic. Joseph Price has a guide that goes into the setup in a bit more depth. Basically, whenever Restic would delete a file (e.g. during a “forget” or “prune” operation), it instead gets hidden and is only deleted when the B2 lifecycle rules decide it should be. I’ve kept the existing Hetzner S3 backups for now, and just added an extra step to the end of my script: a simple restic copy and a restic forget. B2 actually works out cheaper than the Hetzner storage, as they don’t bill you for a minimum of 1TB storage; my current usage is around $3/month. Not a bad price for some extra peace of mind!

Building a travel toolkit

2025-01-02T00:00:00Z

The container for my toolkit, a UGREEN “travel accessories” bag

For a while now, whenever I’ve traveled anywhere I’ve dumped a selection of tools into my backpack just in case I need them. Originally this was mostly focused around being able to open and fix my laptop if anything went wrong, but over time has slowly expanded to include other useful tools.

Repeatedly packing these tools and then returning them to where they belonged was tedious, though. I couldn’t just leave them in the backpack as I often needed them for non-travelling purposes, and I didn’t want to just buy duplicate tools that spent most of their life a few meters away from each other, so I ignored the problem and just dealt with the tedium.

Eventually I acquired enough tools that — while not quite duplicates — I wouldn’t miss often if they were kept in the backpack. Building on these I’ve created a little travel toolkit that contains everything I might want (and more) while away.

The base

The biggest challenge I had before was finding a screwdriver set. I have an iFixit Mako set that did the in-and-out-of-the-bag routine for several years. Nothing else covered the range of drivers I wanted for generic electronic tinkering and more chunky work. I finally found one in the form of a Wera Tool-Check PLUS TR-Edition. “TR” stands for “Tool Rebel” and is Wera’s “fan club” brand. Its signature features over the normal Tool-Check PLUS are a fancy fabric case and a 152mm bit extender; but it also comes with a much different set of bits, which is why I picked it up.

Here’s a comparison

Type	Standard version	Tool Rebel edition
Phillips	2x PH1 3x PH2 1x PH3	1x PH00 1x PH0 1x PH1 1x PH2 1x PH3
Pozidrive	None	1x PZ1 3x PZ2
Slotted	1x 5.5mm	1x 4mm 1x 4.5mm 2x 5.5mm 1x 6.5mm
Torx	1x T10 1x T15 1x T20 1x T25 1x T30 1x T40	1x T10 1x T15 1x T20 1x T25 1x T30 1x T40
Security Torx	1x T10 1x T15 1x T20 1x T25 1x T30	1x T25
Hex	1x H3 1x H4 1x H5 1x H6 1x H8	1x H1.5 1x H2 1x H2.5 1x H3 1x H4 1x H6 1x H8

There are only five bits present in the standard version that are missing in the TR edition: 5mm hex (pretty uncommon) and four sizes of security torx (rare). In exchange for those and the removal of a bunch of duplicates, you get two extra phillips sizes (0 and 00, both very useful for electronics and spectacles), some pozidrive bits (extremely common on random hardware/furniture/etc), smaller hex bits (for electronics, 3D printers, and so on), and a few other bits and pieces.

Overall it’s a vastly superior selection for my needs. And while it doesn’t have the full range of bits provided by the iFixit kit, it does cover almost everything I’m ever actually likely to need while travelling, and it’s probably around a third of the size.

The other core part of the toolkit is the bag. I had a UGREEN “travel accessory” bag hanging around unused, and noticed it was almost the exact right size for the Tool-Check. Now, how many other tools could I stuff in there?

All the tools

The array of tools that make up the travel toolkit

The kit can be broken down into a few sections:

Screwdriving

The aforementioned Wera Tool-Check
Its 152mm bit extender

I’ve talked enough about this already, I think, so I’ll spare you any additional commentary on screwdrivers and bits.

Splitting, gripping and cutting

Engineer tweezers
Engineer mini snips
Engineer mini screw removal pliers
Knipex mini waterpump pliers
Two iFixit spudgers (one metal, one plastic)
iFixit jimmy

I have bigger or slightly different versions of these that stay in my normal toolkit. The tweezers and snips are useful in a variety of situations, and the spudgers are handy for getting inside laptops and other devices. The pliers are less useful, but they’re one of those things where when you do need them there aren’t any good alternatives.

Sewing

Two needles
Some black thread
Set of mini clips

You never know when you’re going to rip a seam in something. I find the clips a lot less fiddly than using pins for keeping material in place when I’m trying to sew.

Computering

Retractable ethernet cable
RJ45 coupler
USB-C to RJ45 adapter
Dual USB-A and USB-C thumb drive, with an Arch ISO on it

Sometimes Wi-Fi just doesn’t cut it, or you need to fiddle with a router that doesn’t expose its admin UI over Wi-Fi. The USB-C adapter is for use with my phone, as it’s often easier to move that get the laptop where it needs to be.

I can boot from the thumb drive into an Arch environment, and from there reinstall my laptop from scratch if needed. There’s enough space left over so it can be used to transfer files as well.

Miscellaneousing

Fabric tape measure
Spirit level
Sharpie
Superglue
Spare batteries: 2 CR2032s, 2 AA, 2 AAA

I’m almost certain I won’t use the spirit level, but it’s tiny and I had a spare so it went in. Everything else is just in the “generally handy to have” category.

Putting it all together

The nicely-organised side of the toolkit

The Tool-Check PLUS fits almost perfectly into one side of the UGREEN bag, leaving a little wiggle room along the side for the longer parts like spudgers. The middle pockets can’t fit much in, but keep the batteries and sewing bits out of the way. Everything else is in a big zip-up compartment in the other side, which is slightly messy but still easy enough to dig through to find whatever I need.

The complete kit weighs in at around 1.2KG, so it’s not exactly lightweight, but it goes in a bag with a heavy laptop and all of its peripherals so it’s not as noticeable as it might otherwise be.

It remains to be seen how much use I’ll actually get out of any of this. Maybe I’ll put a bit of paper in so that I can track how often I use each tool…

Simple backups with Restic and Hetzner Cloud

2024-12-06T00:00:00Z

Restic’s mascot, who’s dual-wielding umbrellas to save you from a rainy day.

I have a confession: for the past few years I’ve not been backing up any of my computers. Everyone knows that you should do backups, but actually getting around to doing it is another story.

Don’t get me wrong: most of my important things are “backed up” by virtue of being committed to remote git repositories, or attached to e-mails, or re-obtainable from the original source, and so on. I don’t think any machine failing completely would be a disaster for me, but it would certainly be a pain.

This week I finally got around to doing something, and it ended up being a lot more straight forward than my previous forays into backup-land.

Restic

After soliciting a few opinions, the choice of backup software came down to either Borg or Restic. I’m pretty sure either would have done what I want, but I leaned towards Restic for a few reasons: it has a more informative website, it’s written in Go rather than Python¹, and Borg seems to be transitioning between major releases at the moment².

The way Restic works is pretty simple: you initialise a ‘repository’, and can then call restic backup /some/path and it’ll get backed up to the repository. Restic handles keeping different backups separate, and only sending data that’s changed, and deduplicating, and so on. You basically point it at a thing you don’t want to lose, and it sorts it out for you. Perfect.

There are equally straight-forward commands for removing old snapshots (restic forget) and verifying backups (restic check). One of the nice things about modern backup solutions is they support a whole range of backends. I was originally going to spin up a small VPS to host my backups, but noticed that Restic supported S3-compatible stores…

Hetzner Cloud Object Storage

I host my servers with Hetzner, and was going to use them to spin up a VPS as well. Despite the “Cloud” branding on a bunch of products, they offer reasonable prices and good service. A couple of months ago, they started offering S3-compatible object storage.

The pricing isn’t totally straight forward, but for continuous use the “free quota” amounts to 1TB of storage and 1TB of egress a month. Ingress is free, as is traffic within the eu-central region (where all my servers are). That quota is only awarded when you pay the “base price”, though, which is €4.99 a month. So basically it’s €5 a month for 1TB of storage and enough egress to fully restore every single byte. That’s better value than any VPS I can find, much cheaper than Amazon S3, and about the same as Backblaze B2.

Getting them to work together

Now you’d think making the tool that supports S3-compatible object storage work with your S3-compatible object storage would be easy, right? Well not quite. The library Restic uses to deal with S3 backends has some strange logic for figuring out the bucket name given a URL. It doesn’t quite seem to work right, though…

Hetzner buckets have URLs like s3://bucketname.hel1.your-objectstorage.com³, but just passing that to Restic gives an error that the bucket is not specified. The docs mention there’s an advanced option to make it use the virtual host for the bucket name: -o s3.bucket-lookup=dns. But that… also doesn’t work. What I ended up doing was specifying the URL as s3://hel1.your-objectstorage.com/bucketname, and also passing in the dns option. The library then seems to muddle its way back to a real, working URL. I’m not sure why it works like this: maybe it’s just a weird aspect of S3 that I’m oblivious to?

The next fun part is that you can configure Restic entirely by using environment variables, except for that -o s3.bucket-lookup=dns argument. That has to go on the command line. I ended up making a little wrapper script to invoke Restic correctly:

#!/bin/sh

# The password restic will use to encrypt your data. You should generate
# something nice and secure.
export RESTIC_PASSWORD=repo-password

# The path to the repository where restic will save the backup. In our case
# this takes the form `s3:<endpoint>/<bucket>`. Your endpoint might be different
# to mine depending on the region your bucket is in.
export RESTIC_REPOSITORY=s3:hel1.your-objectstorage.com/bucket-name

# The access and secret key generated in the 'S3 credentials' section of the
# Hetzner Cloud Console
export AWS_ACCESS_KEY_ID=hetzner-access-key-id
export AWS_SECRET_ACCESS_KEY=hetzner-access-key

# Pass any arguments on to the restic command, along with the magic
# `s3.bucket-lookup` option we need to resolve the S3 URL properly.
exec restic -o s3.bucket-lookup=dns "$@"

Then in the backup script I just alias restic to use the script:

#!/bin/bash

set -eu

# This means any time we use `restic` below, we'll actually execute our special
# script which supplies all the env vars and arguments needed to find the
# repository. Make sure the path matches where you saved the script!
alias restic='~/.bin/restic'

# Actually do the backup. Each directory in the list below will be backed up
# separately.
dirs=(
	"/some/path/to/backup/"
	"/some/other/path/"
)
for i in "${dirs[@]}" 
do
	echo $i
	(cd $i && restic --verbose backup .)
done

# Prune our snapshots. You can tweak the numbers here. Run with `--dry-run` to
# see what effect any changes would have before actually committing to them. 
restic forget --keep-daily 7 --keep-weekly 10 --keep-monthly 24 --keep-yearly 10

The only other notable thing here is that the script changes into the directory to be backed up. If you give Restic an absolute path, it will create a new snapshot if the metadata of any folder in the path changes, which is not what I want.

If it wasn’t for the S3 URL issues, the whole thing would’ve probably taken me about half an hour. That’s including setting up the object storage, installing Restic, and so on. It’s painfully easy. Why didn’t I do this three years ago?!

Addendum: a step-by-step guide

If you want to do this yourself, here’s a quick step-by-step guide:

Log in to the Hetzner Cloud Console, and create a project.
On the “Object Storage” tab, create a new bucket. Note the name and the endpoint.
On the “Security” tab, go to “S3 Credentials” and generate new credentials. Note down the access key and the secret key.
Copy the first shell script above, fill in the password (you can pick!), endpoint, bucket name, access key and secret key.
Run the script with the init argument (e.g. ~/.bin/restic init). This will create a new repository, and only needs to be done once even if you backup multiple machines.
Copy the second shell script above, making sure the restic alias points at the script you saved in step 4. Change the list of directories to whatever you want to backup.
Schedule the script to be run automatically, using crontab or systemd timers or however you prefer.

To check everything is working, you can use the snapshots subcommand to see a list of saved snapshots. You might also want to try to restore a snapshot using the restore subcommand.

I’m not trying to be a language snob, but given the choice between two otherwise equal projects one in Go and one in Python, I’ll take the Go one. I know I’m not going to have weird library issues down the line, and I’m much more comfortable rummaging around the source. ↩︎
With a “Don’t use this in production!” notice on the shiny new version. ↩︎
Aside: I really hate URLs like that. What is with the trend for completely generic domains divorced from the service they’re a part of? ↩︎

Upgrading the RAM in a Dell G15 laptop

2023-07-29T00:00:00Z

The Dell G15

I currently use a Dell G15 laptop for work. It has served me well for a little over a year, but recently it has been struggling a little with my day-to-day workload. It came with 32GB of RAM — the highest possible specification at the time¹ — but that is apparently no longer enough for me.

For a recent project, I was working on a Rust library used in an Android app. That meant running the usual glut of Android tools (Android Studio, an emulator and at least one Gradle daemon) alongside a normal IDE (IntelliJ IDEA). Throw in a web browser and a couple of electron apps, and I often managed to use all 32GB.

When you start swapping memory out to an encrypted disk — even an SSD — it doesn’t make for great performance. At first, I tried to work around this by enabling the Linux out-of-memory (OOM) killer, but it turns out that it’s not too good with Electron apps: it will kill the large browser process, but then the small Electron wrapper will just respawn it.

Can it be upgraded or not?

The obvious solution to not having enough RAM is to add more RAM. A quick look in the manual showed this might not be possible, though. The manual includes the following “Memory specifications” table:

Description	Values
Memory slots	Two SODIMM slots
Memory type	DDR5
Memory speed	4800
Maximum memory configuration	32GB
Minimum memory configuration	8GB
Memory size per slot	8GB or 16GB
Memory configurations supported	8 GB, 1 x 8 GB, DDR5, 4800 MHz 16 GB, 1 x 16 GB, DDR5, 4800 MHz 16 GB, 2 x 8 GB, DDR5, 4800 MHz, dual-channel 32 GB, 2 x 16 GB, DDR5, 4800 MHz, dual-channel

That unambiguously says that an upgrade from 32GB is not possible. I gave up.

Later though, I was complaining about memory issues to a friend, and he pointed out a Dell forum thread where a couple of people claim to have successfully installed dual-channel 32GB modules. Since the alternative was getting an entire new PC after only a year, I decided to give it a go.

The upgrade attempt

I ordered a pair of Crucial 32GB DDR5-4800 SODIMMs, and after they turned up dismantled the laptop. The G15 comes apart pretty normally: there are uncovered screws on the bottom holding the lower part of the case on. With those removed and some gentle prying, it pops off, and you get access to the battery, GPU and motherboard.

The first thing I saw was this:

The G15 motherboard adamantly proclaiming that it doesn’t want 32GB SODIMMs

Not one but two labels that indicate it will only accept 8GB or 16GB modules. Oh well, what’s the worst that can happen?

Oops?

I dutifully installed the new modules, reconnected the battery and put the case back together. I pressed the power button, and… nothing. None of the usual garish lights that immediately come on, no screen output, just a dead laptop. After reading some more of the user manual, I found that there is a tiny status LED on the side next to the ethernet port. Forcing the laptop to power off and back on again, the status LED blinked a distress code at me: 2 amber blinks, 4 white blinks. The manual says that is — unsurprisingly — a memory fault.

I figured at this point that the manual and labels on the motherboard were probably right. I took the laptop apart again, reinstalled the original 2x16GB modules, reassembled it, and pressed the power button. It didn’t boot. I don’t spend a lot of time fiddling inside computers, but I’ve done it enough that I’m reasonably confident I can’t entirely break a computer while swapping some RAM modules. I took to Googling², and found an interesting article that said Dell laptops don’t like to boot after RAM changes unless you clear the CMOS by popping out the battery for 15 minutes.

I opened the laptop up, and looked around for the CMOS battery. There wasn’t one. Turns out they don’t exist any more. I left the main battery disconnected for a while to see if it would help, and it didn’t.

Unexpected success

I started to get worried: if I couldn’t fix this, I wouldn’t be able to work until I got a new PC, and that wasn’t really in my budget at the minute. I sat reading old forum threads and help guides³, none of which were actually useful. Out of nowhere, though, the laptop booted up.

Naturally, I immediately shut the laptop down again, opened it up, and switched back to the new RAM modules. Then I turned it on again and sat waiting. After about 15 minutes of it looking totally dead, it turned on and showed a BIOS warning about the hardware configuration being changed. It then booted perfectly normally, and all 64GB of RAM was visible and usable.

My theory is that the forum threads were right: Dell laptops are funny about RAM upgrades. But somehow in removing the physical CMOS battery, they’ve kept the same “you have to wait 15 minutes” behaviour just without any indication that’s what’s happening. Regardless, I now have enough RAM even for the greediest of IDEs and Electron apps.

Bizarrely, the maximum spec has decreased to 16GB since then. ↩︎
In the generic sense. I use Kagi these days. ↩︎
On my phone because, y’know, the laptop was busted. ↩︎

Debugging beyond the debugger

2019-05-08T00:00:00Z

Real-life debugging tools

Most programming — and sysadmin — problems can be debugged in a fairly straight forward manner using logs, print statements, educated guesses, or an actual debugger. Sometimes, though, the problem is more elusive. There’s a wider box of tricks that can be employed in these cases but I’ve not managed to find a nice overview of them, so here’s mine. I’m mainly focusing on Linux and similar systems, but there tend to be alternatives available for other Operating Systems or VMs if you seek them out.

Networking

tcpdump

tcpdump prints out descriptions of packets on a network interface. You can apply filters to limit which packets are displayed, chose to dump the entire content of the packet, and so forth.

Typical usage might look something like:

# tcpdump -nSi eth0 port 80
tcpdump: verbose output suppressed, use -v or -vv for full protocol decode
listening on eth0, link-type EN10MB (Ethernet), capture size 262144 bytes
16:03:35.577781 IP6 2001:db8::1.54742 > 2001:db8::2.80: Flags [S], seq 2815779044, win 64800, options [mss 1440,sackOK,TS val 2378811665 ecr 0,nop,wscale 7], length 0
16:03:35.586853 IP6 2001:db8::2.80 > 2001:db8::1.54742: Flags [S.], seq 1522609102, ack 2815779045, win 28560, options [mss 1440,sackOK,TS val 3063610173 ecr 2378811665,nop,wscale 7], length 0
16:03:35.586877 IP6 2001:db8::1.54742 > 2001:db8::2.80: Flags [.], ack 1522609103, win 507, options [nop,nop,TS val 2378811674 ecr 3063610173], length 0
16:03:35.620678 IP6 2001:db8::1.54742 > 2001:db8::2.80: Flags [P.], seq 2815779045:2815779399, ack 1522609103, win 507, options [nop,nop,TS val 2378811708 ecr 3063610173], length 354: HTTP: GET / HTTP/1.1

Here you can see the start of a plaintext HTTP request: the three-way handshake as the TCP connection is established followed by a GET request. Even if the data is encrypted as it will be in most cases, it’s often useful to see the “shape” of the transmissions: did the client start sending data when it connected, did the server ever respond, etc.

Daniel Miessler has a good tutorial on tcpdump if you’re not familiar with it and don’t want to jump straight into the man page.

… with Docker

Docker sets up separate network namespaces for each container. To see the traffic across the interfaces of a single container you can nsenter the container’s network namespace:

# nsenter -t $(docker inspect --format '{{.State.Pid}}' my_container) -n tcpdump -nS port 80

This retrieves the PID for the container, and tells nsenter to enter the network (-n) namespace from the given target (-t) PID, and then run the given command (in this case tcpdump ...).

openssl s_client / s_server

When a connection is using TLS it’s often useful to try connecting to the server and see what certificate it presents, algorithms it negotiates, and so forth. OpenSSL offers two useful subcommands which can help with this: s_client for connecting as a client, and s_server for listening to connections.

For example, using s_client to connect to google.com on the standard HTTPS port shows us details about the server cert and its verification status:

$ openssl s_client -connect google.com:443
CONNECTED(00000003)
depth=2 OU = GlobalSign Root CA - R2, O = GlobalSign, CN = GlobalSign
verify return:1
depth=1 C = US, O = Google Trust Services, CN = Google Internet Authority G3
verify return:1
depth=0 C = US, ST = California, L = Mountain View, O = Google LLC, CN = *.google.com
verify return:1
---
Certificate chain
 0 s:C = US, ST = California, L = Mountain View, O = Google LLC, CN = *.google.com
   i:C = US, O = Google Trust Services, CN = Google Internet Authority G3
 1 s:C = US, O = Google Trust Services, CN = Google Internet Authority G3
   i:OU = GlobalSign Root CA - R2, O = GlobalSign, CN = GlobalSign
---
# ...

Whereas connecting to my webserver and providing an unknown host in the SNI field results in an SSL alert 112 (“The server name sent was not recognized”) and no server certificate is sent:

$ openssl s_client -connect chameth.com:443 -servername example.com
CONNECTED(00000003)
140384831313024:error:14094458:SSL routines:ssl3_read_bytes:tlsv1 unrecognized name:../ssl/record/rec_layer_s3.c:1536:SSL alert number 112
---
no peer certificate available
---
# ...

Often if you hit this kind of alert in an application the exact error will be lost somewhere in the many layers between the SSL library and the logs, so being able to directly connect and test can help diagnose a lot of issues.

Once a connection is established you can read and write plain text and it will be encrypted and decrypted automatically.

Java apps

If a Java app is involved in the connection, you can enable a lot of built-in debugging with a simple JVM property: javax.net.debug. You can tweak what exactly gets logged, but the easiest thing to do is just set the property to all and you’ll see information about certificate chains, verification, and packet dumps:

$ java -Djavax.net.debug=all -jar ....
# ...
found key for : duke
chain [0] = [
[
  Version: V1
  Subject: CN=Duke, OU=Java Software, O="Sun Microsystems, Inc.",
  L=Cupertino, ST=CA, C=US
# ...

More information about Java’s debugging options is available on docs.oracle.com.

Thread and core dumps

Higher-level languages frequently provide an interactive way to dump the current execution state of all of their threads (a “thread dump”). This is useful to spot deadlocks, some types of race conditions, and as a quick and dirty method of investigating hangs or excessive CPU usage.

With both Java and Go applications you can send a QUIT signal to have a thread dump printed out; Go applications will quit after doing so, Java ones will carry on running. At most terminals you can hit Ctrl and \ to send a QUIT signal.

For Java you can also use the jstack tool from the JDK to dump threads by PID; this can be useful if the application is running in the background or has redirected sysout:

$ jstack 8321
Attaching to process ID 8321, please wait...
Debugger attached successfully.
Client compiler detected.

Thread t@5: (state = BLOCKED)
 - java.lang.Object.wait(long) @bci=-1107318896 (Interpreted frame)
 - java.lang.Object.wait(long) @bci=0 (Interpreted frame)
 - java.lang.ref.ReferenceQueue.remove(long) @bci=44, line=116 (Interpreted frame)
 - java.lang.ref.ReferenceQueue.remove() @bci=2, line=132 (Interpreted frame)
 - java.lang.ref.Finalizer$FinalizerThread.run() @bci=3, line=159 (Interpreted frame)

# ...

A core dump provides more complete information about the state of a process, but is often more complex to interpret. The gcore utility from GDB will create a core dump of a process with a given PID. You can then generally load the core file using your normal debugger, depending on the language in question.

System calls

strace is the swiss army knife for seeing what a process is doing. It details each system call made by a program (you can filter them down, of course). For example:

$ strace -e read curl https://google.com/
read(3, "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0 \236\0\0\0\0\0\0"..., 832) = 832
read(3, "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0P!\0\0\0\0\0\0"..., 832) = 832
read(3, "\177ELF\2\1\1\3\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0\200l\2\0\0\0\0\0"..., 832) = 832
read(3, "\177ELF\2\1\1\0\0\0\0\0\0\0\0\0\3\0>\0\1\0\0\0\20Q\0\0\0\0\0\0"..., 832) = 832
# ...
read(3, "\0\0\0\0\0\0\0\4\25\345\366\302\273sE6\365wI\225\321|\3435Z\362\216\372\215\251aO"..., 253) = 253
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read(3, "\27\3\3\0!", 5)                = 5
# ...

Brendan Gregg has a nice guide on strace and alternatives.

… with docker

When the application is running in docker you can usually just strace it from the host with the correct PID (from e.g. docker inspect --format '{{.State.Pid}}' my_container). Sometimes you may need to trace the startup of an application though, which is a bit trickier. Instead you can run a new container using the same PID namespace as your target, and the permissions needed to strace:

$ docker run --rm -it --pid=container:my_container \
  --net=container:my_container \
  --cap-add sys_admin \
  --cap-add sys_ptrace \
  alpine

From within the new container you can install strace, and trace any running program within the target container using strace -p as normal. To start a new program you need access to the target container’s filesystem, which you can get to via /proc/1/root (PID 1 being the main process that docker started in the target container).

Files

Sometimes the problem might relate to file access. There are a couple of straight forward — but nonetheless useful — tools which might help here. inotifywait uses the Linux inotify subsystem to watch files or directories for operations. For example:

$ inotifywait -mr site/content
Setting up watches.  Beware: since -r was given, this may take a while!
Watches established.
site/content/post/ MODIFY 2019-05-08-debugging-beyond-the-debugger.md
site/content/post/ OPEN 2019-05-08-debugging-beyond-the-debugger.md
site/content/post/ MODIFY 2019-05-08-debugging-beyond-the-debugger.md
site/content/post/ MODIFY 2019-05-08-debugging-beyond-the-debugger.md
site/content/post/ CLOSE_WRITE,CLOSE 2019-05-08-debugging-beyond-the-debugger.md
# ...

Here the -m switch makes inotifywait monitor the files forever (instead of exiting on the first modification, which is the normal behaviour) and r makes it recurse into the directory and monitor each file and subdirectory in there.

If you want to see what processes currently have a file open, fuser is the go-to tool. For example:

$ fuser -v /
                     USER PID ACCESS COMMAND
/:                   root     kernel mount /
                     chris      2961 .rc.. systemd
                     chris      2986 .r... gdm-x-session
                     chris      2994 .r... dbus-daemon
                     chris      3001 .r... gnome-session-b
# ...

Honourable mentions

These aren’t really debugging tools, but I feel it’s worth mentioning as they often feature somewhere along the debugging-of-weird-problems journey.

I’ve seen some weird and wonderful problems happen because a disk is full, so a quick df early on in the debugging process never hurts. Some apps may hang, some may corrupt their config, some may fall over and die; sometimes the manner in which they fail doesn’t obviously point to a disk space issue.

Another issue that comes up now and then — especially inside VMs or other environment that don’t have a decent amount of “noise” happening — is entropy exhaustion. A quick look at /proc/sys/kernel/random/entropy_avail should be enough to confirm that everything is ticking along nicely. If it’s exceedingly low then you may find that anything involving random number generation stalls (TLS connections for example).